FastQCFastQC Report
Mon 25 Mar 2013
37.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 37.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 26534394
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1311951 4.944341295301487 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1064177 4.0105570151705745 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 990332 3.7322578386376564 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 982791 3.7038381204409645 RNA PCR Primer, Index 1 (100% over 25bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 753231 2.8386968249585802 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 408354 1.5389610932889592 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 240736 0.9072602147989512 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 229408 0.86456845406004 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 226870 0.8550035097843199 RNA PCR Primer, Index 1 (100% over 29bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 213354 0.8040658475185074 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 205528 0.77457205165492 RNA PCR Primer, Index 1 (100% over 25bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 179812 0.6776563278588537 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 129853 0.48937616589246397 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 120390 0.45371301865797276 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 117934 0.44445710725483306 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 106432 0.4011095938350806 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 99504 0.3750000847956053 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 96082 0.36210361540572583 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 94418 0.3558325093084847 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 83051 0.3129937695204194 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 80953 0.30508705041464296 No Hit
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 80780 0.3044350664273697 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 73510 0.27703666418762 RNA PCR Primer, Index 1 (100% over 26bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 69291 0.2611365460240019 RNA PCR Primer, Index 1 (100% over 33bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 66966 0.2523743334782773 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 65661 0.24745618837196734 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 63536 0.23944771453985342 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 62837 0.23681339773578397 RNA PCR Primer, Index 1 (100% over 27bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 61198 0.23063650897774415 RNA PCR Primer, Index 1 (100% over 27bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 57491 0.21666596192096943 RNA PCR Primer, Index 1 (100% over 29bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 56363 0.212414875576205 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 53859 0.20297806688179876 RNA PCR Primer, Index 1 (100% over 25bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 53733 0.202503211492224 RNA PCR Primer, Index 1 (100% over 24bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 52933 0.19948825663778114 RNA PCR Primer, Index 1 (100% over 25bp)
ATGGGAGACCGCCTGGGAATACCGGGTGCTGTAGGCTTTGGAATTCTCG 51445 0.1938804406085174 No Hit
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA 49994 0.1884120662412716 No Hit
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 49910 0.18809549598155512 RNA PCR Primer, Index 1 (100% over 26bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 48456 0.18261581553360517 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 45739 0.17237627510920356 RNA PCR Primer, Index 1 (100% over 30bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGT 45135 0.17009998419409916 RNA PCR Primer, Index 1 (97% over 35bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 44927 0.16931609593194402 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 44576 0.16799328448955722 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 44297 0.16694181898407026 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTTGGAATTCTCGGGTGCC 42077 0.1585753192629913 No Hit
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 40771 0.15365340546311326 RNA PCR Primer, Index 1 (100% over 28bp)
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 40231 0.15161831093636433 RNA PCR Primer, Index 1 (100% over 25bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 38558 0.14531328659701065 RNA PCR Primer, Index 1 (100% over 29bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 35530 0.13390168247294434 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 34960 0.1317535271391538 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 34856 0.13136158300807624 RNA PCR Primer, Index 1 (100% over 28bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 33707 0.12703135409838265 No Hit
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 33173 0.12501887173304202 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 33058 0.12458547197271587 RNA PCR Primer, Index 1 (100% over 31bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 32906 0.12401263055037172 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 32832 0.12373374722633576 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCATGGAATTCTCGGGTGCC 32426 0.12220365763770599 No Hit
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 30927 0.11655438597919364 No Hit
TGTAAACATCCTCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 30426 0.1146662705015988 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGGTTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 29424 0.11089003954640908 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 29200 0.11004585218716509 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 29104 0.10968405760463193 RNA PCR Primer, Index 1 (100% over 25bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACG 28302 0.10666156536305293 RNA PCR Primer, Index 6 (100% over 34bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 27936 0.10528222351714533 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 27542 0.10379735825133221 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA 26734 0.10075225384834491 No Hit
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 26733 0.10074848515477686 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 26590 0.1002095619745452 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 26416715 29.082634 297.18527 28
AATTC 26553820 28.772928 293.79956 26
ATTCT 26343350 27.209839 279.04718 27
TCTCG 26552210 24.913254 256.22025 29
GCCAA 23800295 24.57628 283.02084 37
CCAAG 23578275 24.347023 283.10623 38
TGCCA 24661660 24.274714 266.99146 36
AACTC 18722410 22.684057 327.2467 44
GAATT 26514480 21.898436 224.2979 25
CTCGG 26405810 21.115635 218.83597 30
GAACT 22487010 20.766514 249.47624 43
ACTCC 15324140 19.789507 348.67172 45
GTGCC 24386430 19.50082 216.96336 35
GGAAT 26748355 18.8279 191.79099 24
TGGAA 26717720 18.806337 194.051 23
CAAGG 23222245 18.277254 215.75458 39
GGAAC 21937900 17.2664 215.54903 42
AAGGA 22964540 16.95761 202.44853 40
AGGAA 22416200 16.5527 202.48026 41
TCGGG 26194085 15.965437 166.67282 31
CGGGT 25625560 15.618917 165.52379 32
GGTGC 25075670 15.283756 165.48149 34
CTCCA 9423380 12.1693 102.81819 45
GGGTG 25485200 11.839642 126.141396 33
TCCAG 8192055 8.06352 57.85197 45
TTGGA 11419765 7.6623144 116.26489 22
CCAGT 7355255 7.239849 40.204205 7
CAGTC 5690565 5.601279 37.37992 45
AGTCA 5104420 4.7138777 31.685144 45
GACTG 6143205 4.608926 131.8608 11
TCAGA 4886730 4.5128436 164.36835 8
TATCA 4097990 4.4404593 189.28859 6
CTGGA 5913145 4.436324 44.178318 23
CAGAC 4283370 4.4230256 180.73514 9
TTATC 4266300 4.406628 180.40779 5
CTTAT 3968760 4.0993013 180.22394 4
ACTGA 4428960 4.0900974 161.6785 12
AGACT 4324770 3.993879 161.8515 10
CTGAT 4533355 3.9907048 154.12631 13
ATCAG 4312425 3.9824786 161.9568 7
ATGGA 5614135 3.9517334 46.454144 22
TGATG 5728590 3.8437095 117.49428 14
AGCTT 4337305 3.8181224 153.63396 2
GTCAC 3805700 3.745988 32.622444 45
TAGCT 4140805 3.6451433 153.52039 1
CTTGG 5015675 3.5870059 41.884323 23
GCTTA 4007175 3.5275092 153.59248 3
GTGGA 6070840 3.4715745 18.838106 20
TGTTG 5348655 3.4209394 111.44398 17
GTTGA 4993500 3.3504863 111.96313 18
ATGTT 4154095 3.270426 137.6821 16
TCACG 3272890 3.2215376 26.863836 45
TTGAC 3530670 3.1080427 103.85039 19
CACGT 3057730 3.0097535 21.209059 45
GATGT 4369615 2.9318786 117.58377 15
GTAGA 4055600 2.8546965 62.530525 8
TGACT 3189895 2.8080592 89.082794 20
ACTTG 3055680 2.68991 43.540356 22
GTAGT 3890275 2.610256 81.95361 5
TTTGG 4022625 2.5728257 60.327915 21
TAGTA 2986750 2.4667711 100.77592 6
TAGTT 2920015 2.2988625 86.51871 18
AGTAG 3232780 2.275522 85.965416 7
ACTGG 3020295 2.2659698 39.94382 22
ATAGT 2678865 2.2124875 91.98711 17
AGGTA 3120555 2.1965277 86.867424 3
TTGTA 2774735 2.1844869 87.03869 13
GTATA 2557090 2.111913 88.06564 15
TATAG 2555340 2.1104672 87.907166 16
TGTAT 2644005 2.081566 85.1827 14
GGTAG 3594270 2.0553622 70.13925 4
GACTT 2237795 1.9699272 42.958515 21
AGATT 2376120 1.9624488 72.50022 10
ATTGT 2428790 1.912132 69.404175 12
ACGTA 2044625 1.8881896 15.185581 45
TAGAT 2261555 1.8678291 72.435394 9
AGTTT 2358155 1.8565229 67.367905 19
GATTG 2743650 1.8409055 59.943913 11
TGAGG 3183085 1.8202286 68.58595 1
GAGGT 3132025 1.79103 70.809105 2
GTTTG 2764905 1.7684021 57.766144 20
AGAAC 1574425 1.5253022 39.577763 15
CGTGG 2396150 1.4604664 9.06015 19
GTTGG 2633280 1.435399 25.378805 21
CCTGG 1763300 1.410038 6.192421 23
CTGTT 1649195 1.3838844 37.59334 19
GATGG 2415295 1.3811724 32.001915 21
TGTGG 2519425 1.3733368 7.655181 22
CATGG 1829715 1.3727397 9.014595 23
CGTAG 1826985 1.3706914 9.125612 45
AACTG 1440860 1.3306189 37.142372 17
AGTGG 2274540 1.3006824 15.383647 6
AAGAA 1427950 1.2979172 37.44751 14
AATCC 1065340 1.290765 30.682264 8
ACTGT 1465410 1.2899979 35.320877 18
AGTTG 1875110 1.2581416 27.25504 9
GCTTG 1732800 1.2392278 20.1849 20
AAGCT 1317330 1.2165402 37.806885 1
GGCTT 1669660 1.1940726 22.34002 19
CTGCC 1123250 1.1784418 42.7091 4
AGGCT 1566670 1.1753907 19.981379 18
AGCTG 1564850 1.1740253 30.266783 2
TTGAA 1360295 1.1234741 34.190746 11
CCGTG 1396750 1.1169231 10.27519 18
TTGAT 1413385 1.1127264 38.376698 19
GCTGG 1824470 1.1120243 9.412175 2
TAGAG 1539330 1.0835191 6.397677 45
CTGTG 1514120 1.0828367 8.560618 21
GCCAG 1256530 1.0540944 34.50353 6
CAGTT 1165625 1.0260978 35.674698 8
TCCCG 967190 1.0147138 15.823357 12
TTCAA 922135 0.99919796 32.531982 1
ATCTC 852830 0.98496187 9.925942 24
GCCTG 1218425 0.9743241 11.951891 17
GCTGT 1336180 0.9555815 7.5162163 20
CCTGT 1013470 0.9509127 13.882641 18
CAGAA 977765 0.94725835 23.101559 15
TGGCT 1314345 0.93996596 19.471355 8
CAGTG 1240445 0.9306411 20.182186 5
TCACA 756365 0.9164112 34.465813 2
GCACT 930410 0.91581166 19.417562 5
TTCCC 731075 0.89995086 5.3581066 8
TTCAC 779205 0.8999299 30.280712 1
TCTGG 1257075 0.8990087 5.227105 8
CACTT 777020 0.8974063 22.27536 6
GGACT 1194755 0.8963623 18.767372 4
CACCA 657060 0.8901556 6.3014827 1
CAGGA 1124265 0.8848619 23.895798 12
GCTAA 954880 0.8818216 30.145588 10
TGAAG 1251230 0.8807285 28.892656 12
CCAGG 1049520 0.88043517 21.339417 11
CAAGT 953280 0.8803439 27.871029 3
GAAGA 1182450 0.8731516 30.063305 13
GGCTG 1402680 0.85494107 8.84235 1
AGGAT 1212685 0.8535969 21.375431 13
ATACC 704305 0.85333526 10.911157 19
GTAAT 1015500 0.8387064 25.383183 6
AGAGA 1131510 0.8355362 6.3127985 45
ACAGT 898690 0.82993066 24.55229 4
GCTGC 1022590 0.8177229 32.231247 3
AAGTA 938535 0.8131721 26.13657 4
TTCTG 955530 0.80181134 9.411506 16
GTTCC 823335 0.772514 14.568395 15
GGCTA 1022530 0.7671509 19.81128 9
ATCCA 632450 0.7662758 30.289026 9
ACCAC 562520 0.76207703 6.848946 2
CACAG 729175 0.75294906 27.954906 3
TGCTG 1048110 0.7495655 5.5718527 16
TATGG 1114710 0.7479364 8.749753 22
GACCT 758510 0.7466088 6.1434855 21
CTAAG 805535 0.74390304 24.90191 11
TAGGC 976935 0.7329433 19.344517 17
TAGTG 1086485 0.72899836 10.033617 15
TAATC 669635 0.7255964 27.417421 7
AGTAA 826270 0.71590275 26.135155 5
ATAGG 1013930 0.7136952 21.72517 16
TCAAG 769100 0.7102557 27.737995 2
GAGAT 1001510 0.70495296 5.4330387 45
CCCCC 456225 0.7021659 11.615741 1
CCCAA 518110 0.7019122 14.970194 10
TCCTT 628915 0.6923838 9.485781 11
GGATA 982320 0.69144523 21.302126 14
AGTTC 777860 0.6847489 22.937578 14
CCCGG 763080 0.68230194 13.051343 13
GGCCT 849420 0.679246 12.116842 16
AGATC 733555 0.6774302 6.97059 45
TTTTG 900410 0.67571914 6.901687 14
CCACT 521165 0.6730295 8.455894 5
GAATC 728730 0.6729744 9.756208 6
ATCCC 518565 0.66967183 18.135208 8
AGGTT 997400 0.66922504 16.90169 10
GCCCA 603315 0.66401494 6.127845 11
GTGGT 1209920 0.6595265 8.043961 15
CTACT 569560 0.6578039 7.632774 13
CCCAC 453740 0.6551909 9.524856 4
ACCTG 665210 0.65477264 6.3909163 22
ATTGC 742690 0.65378875 17.872425 2
AAGTT 791345 0.6535756 21.801521 13
CATTG 740165 0.651566 6.284041 2
TGCAC 661635 0.6512538 19.375278 4
GATAG 909570 0.64023733 21.312103 15
TAAGT 774325 0.6395187 22.116941 12
TGGAC 849905 0.63763934 18.158901 3
GTCCG 795055 0.6357726 12.86211 6
TCCCA 488845 0.6312917 12.777371 9
GAAGG 1049225 0.62943125 14.11537 17
TTGCA 714165 0.6286782 17.590174 3
GTCCC 597595 0.6269583 15.645884 11
CGGCC 694905 0.6213438 13.274182 15
CTTGT 736035 0.617627 16.362532 8
CTGTA 698465 0.61485755 5.2837462 19
CACTG 624475 0.61467683 6.7070475 6
AGAAT 705265 0.6110606 7.6464205 4
GTAGG 1062105 0.6073586 14.21797 8
TAGGT 891405 0.5981056 16.363071 9
ATTTG 752865 0.5927138 5.5197926 15
TCCGT 630690 0.59176016 11.603629 17
TCAGT 671010 0.590689 9.302504 12
CCGGC 659985 0.5901204 13.083522 14
GTCAG 783660 0.5879392 18.044985 13
CCAAA 461115 0.586098 12.546013 11
TCTCA 501045 0.5786736 9.366321 25
CTGGC 723395 0.57846904 5.8056836 9
ATTCC 500260 0.577767 5.3310027 1
GTGCT 807865 0.5777521 5.4618254 15
ACGGA 727355 0.57247066 9.25875 3
GGTTG 1040280 0.5670559 13.776509 11
AACTT 522160 0.565797 5.18587 29
TCCGA 572885 0.5638963 15.126336 7
TTGTC 666480 0.5592616 16.384993 9
CTGGT 775410 0.55454165 11.12447 3
AGACC 532175 0.5495261 6.509498 4
TGTCC 585145 0.5490264 13.451703 10
CTTCT 498425 0.548725 5.683813 1
AAGGC 697030 0.54860306 15.244181 18
GATCT 621105 0.5467577 5.807251 45
AGAAG 739005 0.5457004 17.532597 16
GTGGC 894390 0.54513556 17.100624 7
AGCAG 691850 0.54452616 8.060782 16
AAAGA 597965 0.5435128 7.8627343 2
ATCTG 615980 0.54224616 6.1236496 7
GTTGT 844890 0.5403821 13.386438 12
GGTCC 675150 0.5398895 12.764985 5
GAGTC 711020 0.5334412 17.996418 11
AAAGC 549065 0.53193396 9.775899 14
GTTAT 672665 0.5295741 7.4105206 21
CTGCT 563640 0.5288489 6.4847417 8
TTGTG 826050 0.5283323 5.148663 13
ACATC 435990 0.52824515 11.939622 6
CTCCT 428705 0.5277344 10.503572 10
GGGCT 865135 0.5273045 5.2822204 18
AAGCA 542480 0.52555436 9.985963 15
ACATG 568370 0.5248836 9.741407 22
TACTG 590665 0.51996136 5.636382 14
CTTTT 525230 0.5171333 8.586703 13
ACCCT 397840 0.51376826 5.6207976 21
CAAAG 530245 0.5137011 11.095844 1
AACAT 450855 0.51250243 10.988386 5
TTCCG 544500 0.5108903 12.307478 16
TATTG 648450 0.5105102 11.624639 1
CCCCG 434420 0.50961643 5.103975 10
GTTCT 604630 0.50736153 9.299391 15
CACTA 416230 0.5043039 5.643476 6
TGACA 541905 0.5004435 9.531673 20
TTTGA 627060 0.4936703 5.2966704 16
CGATG 656670 0.4926652 5.7366877 9
ATCCT 425115 0.49097946 7.078676 8
CGGAA 617380 0.48591393 8.127655 4
TCTCC 394090 0.48512346 10.777403 9
TGGAG 845685 0.48360005 13.878929 9
GGAGT 842895 0.48200452 13.87018 10
ATTCA 438335 0.4749667 6.6707144 4
CCTTT 431285 0.47480938 9.580135 12
TACCA 390530 0.47316578 7.2502236 23
CCAGA 457845 0.47277257 6.1507792 25
AAAAG 519865 0.47252482 9.344604 13
ACTAC 385780 0.46741077 5.756297 7
TGGTC 653070 0.46704903 10.912368 4
TCGCC 444045 0.4658635 6.408038 27
CCGAA 450570 0.4652604 9.523093 8
GCTAC 471505 0.46410698 7.5154214 2
CCCCA 320870 0.46332943 9.757058 3
CAAAA 388425 0.46319968 12.560449 12
CTGTC 492995 0.46256447 6.4400105 12
CAACG 443900 0.45837295 10.57462 1
TAGAA 528635 0.45802364 5.994807 19
GCAGC 542135 0.45479336 8.299932 17
GACAT 490770 0.4532209 9.512718 21
ACATT 411565 0.44595954 6.668985 2
ACTGC 450215 0.44315103 6.420568 7
CTCAC 341850 0.4414631 6.334531 4
CTACA 360660 0.43697536 9.324707 3
GTAAA 503695 0.43641502 8.663486 2
TGTAA 526495 0.43483472 8.341995 1
AGAGC 551805 0.43430254 5.0252175 11
AACGC 419435 0.4331103 6.1096635 8
ACTAG 464460 0.4289239 5.422926 1
AATTT 439450 0.42585778 6.286509 14
ACCTC 326470 0.42160147 5.6401668 5
AAATT 410995 0.41782427 6.753416 13
AGCCC 379055 0.41719198 6.5177355 10
TTTGT 554090 0.4158208 7.6775618 12
AAACA 348025 0.4150224 11.849289 4
AACGG 524880 0.413111 9.158372 2
TACCC 319405 0.41247776 5.992205 20
TAAAC 362505 0.4120719 11.38458 3
TCTGT 489385 0.41065627 5.060772 17
CAGCT 415090 0.40857714 10.376165 18
TAATT 417270 0.40436378 5.4745884 7
CCGAT 409390 0.40296656 6.3756247 8
GGTTC 559890 0.40041044 5.386994 9
GCATT 453105 0.39886758 6.038418 1
CCGAC 361110 0.3974415 5.798363 12
TGGTA 588925 0.39515072 5.0804214 16
ACCAG 379430 0.39180097 6.2364917 24
AGTGA 553155 0.3893603 6.080464 16
TAAAT 382665 0.3890235 6.4326057 12
CATCC 300655 0.38826412 12.53164 7
AAATA 356135 0.3798165 5.8813014 12
CTCAA 312240 0.37830973 9.663128 26
CAGCA 361470 0.3732554 6.2833624 4
AAGGT 525680 0.3700209 6.032751 11
AGTTA 447205 0.3693488 6.8067193 20
CATCT 318140 0.3674305 7.1862206 6
TGGGC 596420 0.36352122 5.6991696 17
TGACC 367740 0.3619701 5.9946113 20
GAGTT 529750 0.3554461 5.875863 19
TGAGT 526125 0.35301384 5.718308 18
CGACT 357415 0.3518071 6.2655954 13
TCCCC 254995 0.3509865 5.8998637 9
ATCAC 285830 0.3463114 5.380316 21
TCAAT 313165 0.33933625 8.659786 27
TTATG 424185 0.3339514 7.403084 21
CGAAG 423380 0.33322465 6.86522 9
CATTC 287705 0.33228013 7.3074865 3
CTAGA 354335 0.3272246 5.251934 2
GTCTC 341900 0.32079592 5.199738 11
TTCAG 360990 0.3177789 6.0816746 11
GAAGC 395820 0.3115333 5.4612308 19
TAGAC 333245 0.3077482 5.5933676 3
TCACT 259405 0.2995955 5.4133043 5
TCAAC 245485 0.29742944 6.794845 6
TATCT 287155 0.29660013 8.477424 23
TACAT 271835 0.29455227 8.006519 4
CTAAA 258695 0.29406756 7.159147 11
CAATT 270620 0.29323575 6.2612863 28
TTGGG 535395 0.29184344 5.1169333 16
CTCGC 277415 0.291046 6.771991 26
TTTCC 253290 0.27885145 5.003221 2
AGCTA 295260 0.2726695 7.002784 1
TAGCC 271085 0.26683158 5.4592857 9
CATAG 287260 0.26528156 7.8413887 16
GTTCA 299455 0.2636097 6.267197 10
CTAGC 265530 0.26136377 5.353462 8
CCGTA 264560 0.26040897 5.047056 5
ACGCT 251940 0.247987 5.4486604 9
TTACC 195360 0.2256278 6.8757935 22
TGCTA 253035 0.22274627 5.470062 9
TGTGC 300790 0.21511272 5.326542 14
ACCTA 159970 0.19381951 6.473279 6
CCTAG 187315 0.18437599 5.284388 7
GTTAC 200060 0.17611247 5.2705665 21